HCSGD entry for TRIT1
1. General information
| Official gene symbol | TRIT1 |
|---|---|
| Entrez ID | 54802 |
| Gene full name | tRNA isopentenyltransferase 1 |
| Other gene symbols | IPT MOD5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0008033 | TRNA processing | IEA | biological_process |
| GO:0016740 | Transferase activity | IEA | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0052381 | TRNA dimethylallyltransferase activity | TAS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3030565138 | 0.2836820106 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2776672935 |
| GSE13712_SHEAR | Up | 0.0398643243 |
| GSE13712_STATIC | Down | -0.0044475156 |
| GSE19018 | Down | -0.0350150081 |
| GSE19899_A1 | Up | 0.3695224808 |
| GSE19899_A2 | Up | 0.5751528139 |
| PubMed_21979375_A1 | Up | 0.2110248639 |
| PubMed_21979375_A2 | Up | 0.3753128841 |
| GSE35957 | Down | -0.8580584229 |
| GSE36640 | Down | -0.5333422534 |
| GSE54402 | Up | 0.2915210949 |
| GSE9593 | Down | -0.3514193199 |
| GSE43922 | Up | 0.3106057001 |
| GSE24585 | Down | -0.0753225120 |
| GSE37065 | Up | 0.0213461828 |
| GSE28863_A1 | Up | 0.0588924628 |
| GSE28863_A2 | Up | 0.3599667892 |
| GSE28863_A3 | Down | -0.1979418879 |
| GSE28863_A4 | Down | -0.2904278642 |
| GSE48662 | Down | -0.2682071085 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-183-5p | MIMAT0000261 | MIRT047047 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3615 | MIMAT0017994 | MIRT052858 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
