HCSGD entry for PCDHB17

1. General information

Official gene symbolPCDHB17
Entrez ID54661
Gene full nameprotocadherin beta 17 pseudogene
Other gene symbolsME4 PCDH-psi1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.77010330150.75791141670.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0837671311
GSE13712_SHEARDown-0.0835607970
GSE13712_STATICDown-0.1735667740
GSE19018Up0.1066887564
GSE19899_A1Up0.1049616741
GSE19899_A2Down-0.0451857782
PubMed_21979375_A1Down-0.1000258554
PubMed_21979375_A2Down-0.1277444659
GSE35957Up0.2189382387
GSE36640Up0.0645610691
GSE54402Up0.0945972574
GSE9593Up0.0715491648
GSE43922Down-0.0451622790
GSE24585Up0.3271637816
GSE37065Down-0.0859253976
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.0910244193

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.