HCSGD entry for PCDHB18

1. General information

Official gene symbolPCDHB18
Entrez ID54660
Gene full nameprotocadherin beta 18 pseudogene
Other gene symbolsPCDH-psi2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.05777730710.72926783560.52090947981.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0940290191
GSE13712_SHEARDown-0.1016728721
GSE13712_STATICDown-0.1654099314
GSE19018Up0.0583919791
GSE19899_A1Down-0.0852780911
GSE19899_A2Down-0.1923246632
PubMed_21979375_A1Up0.1517877281
PubMed_21979375_A2Up0.0298631847
GSE35957Up0.1810741387
GSE36640Up0.2011274145
GSE54402Down-0.0876625914
GSE9593Up0.2401517086
GSE43922Down-0.5371268220
GSE24585Up1.0376857042
GSE37065Down-0.0977465428
GSE28863_A1Up1.1805412730
GSE28863_A2Up0.8587410004
GSE28863_A3Up0.2819921367
GSE28863_A4Up0.2230098254
GSE48662Down-0.0074688226

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.