HCSGD entry for SCAND2P
1. General information
| Official gene symbol | SCAND2P |
|---|---|
| Entrez ID | 54581 |
| Gene full name | SCAN domain containing 2 pseudogene |
| Other gene symbols | SCAND2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3960547016 | 0.8776981764 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1174093504 |
| GSE13712_SHEAR | Down | -0.0050556200 |
| GSE13712_STATIC | Up | 0.0297734777 |
| GSE19018 | Up | 0.1693050612 |
| GSE19899_A1 | Up | 0.0101095050 |
| GSE19899_A2 | Up | 0.0419883284 |
| PubMed_21979375_A1 | Up | 0.2091050143 |
| PubMed_21979375_A2 | Up | 0.0671368325 |
| GSE35957 | Up | 0.0597449578 |
| GSE36640 | Up | 0.1947390821 |
| GSE54402 | Up | 0.0689108015 |
| GSE9593 | Up | 0.1130003657 |
| GSE43922 | Up | 0.0368066527 |
| GSE24585 | Up | 0.0310636903 |
| GSE37065 | Up | 0.0489052538 |
| GSE28863_A1 | Down | -0.0099765899 |
| GSE28863_A2 | Up | 0.5430185046 |
| GSE28863_A3 | Up | 0.1079744930 |
| GSE28863_A4 | Down | -0.3342149428 |
| GSE48662 | Up | 0.3466262258 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018118 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029695 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
