HCSGD entry for DDX49
1. General information
| Official gene symbol | DDX49 |
|---|---|
| Entrez ID | 54555 |
| Gene full name | DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 |
| Other gene symbols | R27090_2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0008026 | ATP-dependent helicase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1046383078 | 0.6283141750 | 0.6717260912 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0494516213 |
| GSE13712_SHEAR | Down | -0.0739750159 |
| GSE13712_STATIC | Up | 0.1314104936 |
| GSE19018 | Down | -0.3005118369 |
| GSE19899_A1 | Up | 0.1104982859 |
| GSE19899_A2 | Up | 1.0220310284 |
| PubMed_21979375_A1 | Up | 1.9597218597 |
| PubMed_21979375_A2 | Up | 1.3362403432 |
| GSE35957 | Up | 0.0426183961 |
| GSE36640 | Up | 0.2143017424 |
| GSE54402 | Up | 0.0982662077 |
| GSE9593 | Down | -0.3000827215 |
| GSE43922 | Up | 0.3176039467 |
| GSE24585 | Down | -0.4166604739 |
| GSE37065 | Down | -0.3588099451 |
| GSE28863_A1 | Up | 0.0280186142 |
| GSE28863_A2 | Down | -0.1938110164 |
| GSE28863_A3 | Down | -0.1215440013 |
| GSE28863_A4 | Down | -0.0524795016 |
| GSE48662 | Up | 0.1937189904 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT032226 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050235 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3177-3p | MIMAT0015054 | MIRT052803 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
