HCSGD entry for RHOF
1. General information
| Official gene symbol | RHOF |
|---|---|
| Entrez ID | 54509 |
| Gene full name | ras homolog family member F (in filopodia) |
| Other gene symbols | ARHF RIF |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003924 | GTPase activity | NAS | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005856 | Cytoskeleton | NAS | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006184 | GTP catabolic process | NAS | biological_process |
| GO:0007015 | Actin filament organization | IDA | biological_process |
| GO:0007264 | Small GTPase mediated signal transduction | IEA TAS | biological_process |
| GO:0008152 | Metabolic process | NAS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0051056 | Regulation of small GTPase mediated signal transduction | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0304538239 | 0.9560866874 | 0.4040197077 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0808436989 |
| GSE13712_SHEAR | Up | 1.1534171959 |
| GSE13712_STATIC | Up | 0.6829538697 |
| GSE19018 | Down | -0.0095182226 |
| GSE19899_A1 | Up | 0.1921767033 |
| GSE19899_A2 | Up | 0.7699342327 |
| PubMed_21979375_A1 | Up | 1.0632569967 |
| PubMed_21979375_A2 | Up | 0.6976713826 |
| GSE35957 | Down | -0.0738442501 |
| GSE36640 | Down | -0.1529124060 |
| GSE54402 | Up | 0.1557329557 |
| GSE9593 | Up | 0.0407118835 |
| GSE43922 | Up | 0.4226187515 |
| GSE24585 | Up | 0.3305515343 |
| GSE37065 | Up | 0.1153113355 |
| GSE28863_A1 | Down | -0.2986488586 |
| GSE28863_A2 | Down | -0.2906242946 |
| GSE28863_A3 | Up | 0.1073456849 |
| GSE28863_A4 | Up | 0.1071047460 |
| GSE48662 | Up | 0.0888602236 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019255 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028419 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031459 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
