HCSGD entry for ANKIB1
1. General information
| Official gene symbol | ANKIB1 |
|---|---|
| Entrez ID | 54467 |
| Gene full name | ankyrin repeat and IBR domain containing 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2057726416 | 0.3073314274 | 0.8745044398 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2600227747 |
| GSE13712_SHEAR | Up | 0.4212362397 |
| GSE13712_STATIC | Up | 0.4446187179 |
| GSE19018 | Up | 0.2475719975 |
| GSE19899_A1 | Down | -0.2232876088 |
| GSE19899_A2 | Down | -0.3696660189 |
| PubMed_21979375_A1 | Down | -0.4880416269 |
| PubMed_21979375_A2 | Up | 0.2154862849 |
| GSE35957 | Up | 0.2295805877 |
| GSE36640 | Up | 0.0636613560 |
| GSE54402 | Down | -0.0650865140 |
| GSE9593 | Up | 0.1843448798 |
| GSE43922 | Down | -0.0676864206 |
| GSE24585 | Up | 0.4471475977 |
| GSE37065 | Up | 0.2479128963 |
| GSE28863_A1 | Up | 0.3794112697 |
| GSE28863_A2 | Up | 0.7177622373 |
| GSE28863_A3 | Down | -0.5340994608 |
| GSE28863_A4 | Down | -0.2601293448 |
| GSE48662 | Down | -0.5858316861 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT002805 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-1 | MIMAT0000416 | MIRT002805 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT018457 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050234 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | NA | hsa-miR-1 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
