HCSGD entry for PRR13
1. General information
| Official gene symbol | PRR13 |
|---|---|
| Entrez ID | 54458 |
| Gene full name | proline rich 13 |
| Other gene symbols | TXR1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0357573155 | 0.9750563125 | 0.4309378663 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6335295175 |
| GSE13712_SHEAR | Up | 0.1189620861 |
| GSE13712_STATIC | Up | 0.3724259503 |
| GSE19018 | Up | 0.3585257011 |
| GSE19899_A1 | Up | 0.2851736386 |
| GSE19899_A2 | Up | 0.6785327061 |
| PubMed_21979375_A1 | Up | 0.3642215476 |
| PubMed_21979375_A2 | Up | 0.4635405911 |
| GSE35957 | Up | 0.2131677720 |
| GSE36640 | Up | 0.1763575103 |
| GSE54402 | Up | 0.1617566446 |
| GSE9593 | Up | 0.2402154504 |
| GSE43922 | Up | 0.1445798232 |
| GSE24585 | Up | 0.1952774588 |
| GSE37065 | Down | -0.0412488945 |
| GSE28863_A1 | Up | 0.0364271648 |
| GSE28863_A2 | Down | -0.2232724083 |
| GSE28863_A3 | Down | -0.1601810208 |
| GSE28863_A4 | Down | -0.0418783070 |
| GSE48662 | Up | 0.0004562400 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-425-5p | MIMAT0003393 | MIRT039311 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-625-5p | MIMAT0003294 | MIRT039592 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT051711 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
