HCSGD entry for ATAD2B
1. General information
| Official gene symbol | ATAD2B |
|---|---|
| Entrez ID | 54454 |
| Gene full name | ATPase family, AAA domain containing 2B |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0017111 | Nucleoside-triphosphatase activity | IEA | molecular_function |
| GO:0070577 | Histone acetyl-lysine binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9832042324 | 0.0143806086 | 0.9999902473 | 0.2356861768 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3285740408 |
| GSE13712_SHEAR | Up | 0.1657193395 |
| GSE13712_STATIC | Down | -0.1481829464 |
| GSE19018 | Down | -0.5274510566 |
| GSE19899_A1 | Down | -0.0274877151 |
| GSE19899_A2 | Down | -0.6194698166 |
| PubMed_21979375_A1 | Down | -0.5632458637 |
| PubMed_21979375_A2 | Down | -0.3438820749 |
| GSE35957 | Down | -0.2271659684 |
| GSE36640 | Down | -0.4086017962 |
| GSE54402 | Down | -0.1845095922 |
| GSE9593 | Down | -0.3865509465 |
| GSE43922 | Down | -0.0758848319 |
| GSE24585 | Down | -0.4256538699 |
| GSE37065 | Up | 0.0149912566 |
| GSE28863_A1 | Up | 0.4859134681 |
| GSE28863_A2 | Up | 0.0596034139 |
| GSE28863_A3 | Down | -0.5023769585 |
| GSE28863_A4 | Down | -0.3741291222 |
| GSE48662 | Down | -0.1107144567 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029473 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030851 | Microarray | Functional MTI (Weak) | 18591254 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
