HCSGD entry for RBM27
1. General information
| Official gene symbol | RBM27 |
|---|---|
| Entrez ID | 54439 |
| Gene full name | RNA binding motif protein 27 |
| Other gene symbols | ARRS1 Psc1 ZC3H18 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0016607 | Nuclear speck | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8224651039 | 0.4752703013 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1888417759 |
| GSE13712_SHEAR | Up | 0.0113104934 |
| GSE13712_STATIC | Down | -0.3183600327 |
| GSE19018 | Down | -0.0622588307 |
| GSE19899_A1 | Down | -0.0521855298 |
| GSE19899_A2 | Up | 0.1063813519 |
| PubMed_21979375_A1 | Down | -0.2981695834 |
| PubMed_21979375_A2 | Up | 0.0399041089 |
| GSE35957 | Down | -0.0577052505 |
| GSE36640 | Down | -0.7773371968 |
| GSE54402 | Up | 0.1622790218 |
| GSE9593 | Down | -0.0670209946 |
| GSE43922 | Down | -0.0056291630 |
| GSE24585 | Up | 0.0375648633 |
| GSE37065 | Up | 0.0539452718 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.1278086422 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036468 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045304 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046520 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049845 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050363 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
