HCSGD entry for FAM3B
1. General information
| Official gene symbol | FAM3B |
|---|---|
| Entrez ID | 54097 |
| Gene full name | family with sequence similarity 3, member B |
| Other gene symbols | 2-21 C21orf11 C21orf76 ORF9 PANDER |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005125 | Cytokine activity | NAS | molecular_function |
| GO:0005576 | Extracellular region | NAS | cellular_component |
| GO:0005615 | Extracellular space | IEA | cellular_component |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0030073 | Insulin secretion | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7411230766 | 0.7359578018 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0612668806 |
| GSE13712_SHEAR | Down | -0.0299929172 |
| GSE13712_STATIC | Down | -0.0252364282 |
| GSE19018 | Down | -0.0359164311 |
| GSE19899_A1 | Up | 0.0624527689 |
| GSE19899_A2 | Up | 0.0422920556 |
| PubMed_21979375_A1 | Up | 0.0623030986 |
| PubMed_21979375_A2 | Up | 0.1507716743 |
| GSE35957 | Up | 0.1103270557 |
| GSE36640 | Up | 0.1709157282 |
| GSE54402 | Down | -0.0677647213 |
| GSE9593 | Down | -0.0627604323 |
| GSE43922 | Up | 0.0100817171 |
| GSE24585 | Down | -0.4380279185 |
| GSE37065 | Up | 0.0390910801 |
| GSE28863_A1 | Down | -0.0469676003 |
| GSE28863_A2 | Down | -0.0478623797 |
| GSE28863_A3 | Up | 0.1969009538 |
| GSE28863_A4 | Up | 0.0451385781 |
| GSE48662 | Up | 0.1243995384 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019077 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 10454622 | NHF grown to and left at confluence for 2-21 days showed little (<10%) CpG methylation in the ER and ECAD CpG islands |
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