HCSGD entry for SETD4
1. General information
| Official gene symbol | SETD4 |
|---|---|
| Entrez ID | 54093 |
| Gene full name | SET domain containing 4 |
| Other gene symbols | C21orf18 C21orf27 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7785390601 | 0.6322994871 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0858700418 |
| GSE13712_SHEAR | Down | -0.1107487026 |
| GSE13712_STATIC | Down | -0.0095314452 |
| GSE19018 | Down | -0.1483756611 |
| GSE19899_A1 | Down | -0.0394418214 |
| GSE19899_A2 | Down | -0.0931303664 |
| PubMed_21979375_A1 | Down | -1.1308782566 |
| PubMed_21979375_A2 | Up | 0.0216104706 |
| GSE35957 | Down | -0.0486100246 |
| GSE36640 | Up | 0.1697093521 |
| GSE54402 | Up | 0.0063465033 |
| GSE9593 | Up | 0.0997302528 |
| GSE43922 | Up | 0.1107563186 |
| GSE24585 | Down | -0.0477798351 |
| GSE37065 | Down | -0.0033694275 |
| GSE28863_A1 | Up | 0.0748542816 |
| GSE28863_A2 | Up | 0.1181286618 |
| GSE28863_A3 | Up | 0.1309367337 |
| GSE28863_A4 | Up | 0.0476636253 |
| GSE48662 | Up | 0.0119946599 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-192-5p | MIMAT0000222 | MIRT004168 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-346 | MIMAT0000773 | MIRT004226 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-let-7a-3p | MIMAT0004481 | MIRT038999 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
