HCSGD entry for STX18
1. General information
| Official gene symbol | STX18 |
|---|---|
| Entrez ID | 53407 |
| Gene full name | syntaxin 18 |
| Other gene symbols | Ufe1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005484 | SNAP receptor activity | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005783 | Endoplasmic reticulum | TAS | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006888 | ER to Golgi vesicle-mediated transport | TAS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0571034687 | 0.8587764675 | 0.5197165975 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3653687532 |
| GSE13712_SHEAR | Up | 0.1300370575 |
| GSE13712_STATIC | Up | 0.1727898943 |
| GSE19018 | Up | 0.0819989380 |
| GSE19899_A1 | Up | 0.5164405434 |
| GSE19899_A2 | Up | 0.6140583832 |
| PubMed_21979375_A1 | Up | 0.8922470893 |
| PubMed_21979375_A2 | Up | 0.5675542504 |
| GSE35957 | Down | -0.3101112719 |
| GSE36640 | Up | 0.0390974810 |
| GSE54402 | Up | 0.4243111424 |
| GSE9593 | Up | 0.3203245317 |
| GSE43922 | Up | 0.4074303187 |
| GSE24585 | Down | -0.0145749858 |
| GSE37065 | Up | 0.0071436285 |
| GSE28863_A1 | Down | -0.3098999639 |
| GSE28863_A2 | Down | -0.3703445820 |
| GSE28863_A3 | Down | -0.0842218620 |
| GSE28863_A4 | Down | -0.0899052210 |
| GSE48662 | Down | -0.2387869041 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022496 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
