HCSGD entry for PGM5
1. General information
| Official gene symbol | PGM5 |
|---|---|
| Entrez ID | 5239 |
| Gene full name | phosphoglucomutase 5 |
| Other gene symbols | PGMRP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000287 | Magnesium ion binding | IEA | molecular_function |
| GO:0001725 | Stress fiber | IDA | cellular_component |
| GO:0004614 | Phosphoglucomutase activity | IDA | molecular_function |
| GO:0005198 | Structural molecule activity | NAS | molecular_function |
| GO:0005829 | Cytosol | IBA | cellular_component |
| GO:0005913 | Cell-cell adherens junction | IDA | cellular_component |
| GO:0005914 | Spot adherens junction | IDA | cellular_component |
| GO:0005925 | Focal adhesion | IDA | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | IEA | biological_process |
| GO:0005978 | Glycogen biosynthetic process | IBA | biological_process |
| GO:0005992 | Trehalose biosynthetic process | IBA | biological_process |
| GO:0006006 | Glucose metabolic process | IEA | biological_process |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0009898 | Cytoplasmic side of plasma membrane | IDA | cellular_component |
| GO:0014704 | Intercalated disc | IDA | cellular_component |
| GO:0016010 | Dystrophin-associated glycoprotein complex | IBA ISS | cellular_component |
| GO:0016868 | Intramolecular transferase activity, phosphotransferases | IEA | molecular_function |
| GO:0019388 | Galactose catabolic process | IBA | biological_process |
| GO:0030018 | Z disc | IBA | cellular_component |
| GO:0042383 | Sarcolemma | IDA | cellular_component |
| GO:0043034 | Costamere | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6117485658 | 0.0580489419 | 0.9999902473 | 0.4530182034 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0450302604 |
| GSE13712_SHEAR | Up | 0.0780663562 |
| GSE13712_STATIC | Down | -0.0615167743 |
| GSE19018 | Up | 0.2342028400 |
| GSE19899_A1 | Down | -0.2513410755 |
| GSE19899_A2 | Down | -0.7072892229 |
| PubMed_21979375_A1 | Down | -0.6361378273 |
| PubMed_21979375_A2 | Down | -0.5846790918 |
| GSE35957 | Up | 0.0926418040 |
| GSE36640 | Up | 0.6861081704 |
| GSE54402 | Down | -0.8354043675 |
| GSE9593 | Down | -0.0040495634 |
| GSE43922 | Down | -1.8553774495 |
| GSE24585 | Up | 0.3310366461 |
| GSE37065 | Up | 0.0945195916 |
| GSE28863_A1 | Down | -0.2273961498 |
| GSE28863_A2 | Down | -0.0894259760 |
| GSE28863_A3 | Up | 0.3253331194 |
| GSE28863_A4 | Down | -0.0260093610 |
| GSE48662 | Up | 0.1351660144 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017304 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022385 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
