HCSGD entry for PER1
1. General information
| Official gene symbol | PER1 |
|---|---|
| Entrez ID | 5187 |
| Gene full name | period circadian clock 1 |
| Other gene symbols | PER RIGUI hPER |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IEA ISS | biological_process |
| GO:0000978 | RNA polymerase II core promoter proximal region sequence-specific DNA binding | IDA | molecular_function |
| GO:0000988 | Protein binding transcription factor activity | IEA | molecular_function |
| GO:0000989 | Transcription factor binding transcription factor activity | ISS | molecular_function |
| GO:0004871 | Signal transducer activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007623 | Circadian rhythm | IEA TAS | biological_process |
| GO:0009416 | Response to light stimulus | IEA | biological_process |
| GO:0009649 | Entrainment of circadian clock | TAS | biological_process |
| GO:0032922 | Circadian regulation of gene expression | IDA | biological_process |
| GO:0045892 | Negative regulation of transcription, DNA-templated | ISS | biological_process |
| GO:0070888 | E-box binding | IDA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6418179704 | 0.9336090498 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | - | - |
| GSE13712_SHEAR | - | - |
| GSE13712_STATIC | - | - |
| GSE19018 | - | - |
| GSE19899_A1 | - | - |
| GSE19899_A2 | - | - |
| PubMed_21979375_A1 | - | - |
| PubMed_21979375_A2 | - | - |
| GSE35957 | - | - |
| GSE36640 | - | - |
| GSE54402 | - | - |
| GSE9593 | - | - |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.1994166800 |
| GSE28863_A2 | Down | -0.3299031906 |
| GSE28863_A3 | Up | 0.2473360401 |
| GSE28863_A4 | Down | -0.0076586952 |
| GSE48662 | Up | 0.1361873903 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016887 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-484 | MIMAT0002174 | MIRT042311 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050902 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052278 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
