HCSGD entry for PHAX
1. General information
| Official gene symbol | PHAX |
|---|---|
| Entrez ID | 51808 |
| Gene full name | phosphorylated adaptor for RNA export |
| Other gene symbols | RNUXA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000387 | Spliceosomal snRNP assembly | TAS | biological_process |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006408 | SnRNA export from nucleus | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0015030 | Cajal body | IEA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0015643 | Toxic substance binding | IEA | molecular_function |
| GO:0016070 | RNA metabolic process | TAS | biological_process |
| GO:0034660 | NcRNA metabolic process | TAS | biological_process |
| GO:0043025 | Neuronal cell body | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0788696478 | 0.6925326735 | 0.5911687358 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0618164772 |
| GSE13712_SHEAR | Up | 0.2820015860 |
| GSE13712_STATIC | Up | 0.1947434781 |
| GSE19018 | Down | -0.6300215824 |
| GSE19899_A1 | Down | -0.0851979773 |
| GSE19899_A2 | Up | 0.2322122723 |
| PubMed_21979375_A1 | Up | 0.2488292412 |
| PubMed_21979375_A2 | Down | -0.1980030772 |
| GSE35957 | Up | 0.1791073409 |
| GSE36640 | Up | 0.0537861234 |
| GSE54402 | Down | -0.1373397167 |
| GSE9593 | Up | 0.1912163160 |
| GSE43922 | Down | -0.0194635081 |
| GSE24585 | Down | -0.0064643176 |
| GSE37065 | Up | 0.1104548359 |
| GSE28863_A1 | Up | 0.8375583006 |
| GSE28863_A2 | Up | 1.1645903994 |
| GSE28863_A3 | Up | 0.6679638363 |
| GSE28863_A4 | Down | -0.2010422281 |
| GSE48662 | Down | -0.2902401386 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-769-3p | MIMAT0003887 | MIRT039057 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-301a-3p | MIMAT0000688 | MIRT044226 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046788 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
