HCSGD entry for LUC7L3
1. General information
| Official gene symbol | LUC7L3 |
|---|---|
| Entrez ID | 51747 |
| Gene full name | LUC7-like 3 (S. cerevisiae) |
| Other gene symbols | CRA CREAP-1 CROP LUC7A OA48-18 hLuc7A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003729 | MRNA binding | IEA IMP | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005685 | U1 snRNP | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0005925 | Focal adhesion | IDA | cellular_component |
| GO:0006376 | MRNA splice site selection | IEA | biological_process |
| GO:0008380 | RNA splicing | IMP | biological_process |
| GO:0016607 | Nuclear speck | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4446242202 | 0.1967808822 | 0.9999902473 | 0.8586752237 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1207922284 |
| GSE13712_SHEAR | Up | 0.0677841483 |
| GSE13712_STATIC | Up | 0.0244487858 |
| GSE19018 | Down | -0.6185244992 |
| GSE19899_A1 | Up | 0.1527703245 |
| GSE19899_A2 | Down | -0.2540706576 |
| PubMed_21979375_A1 | Down | -0.0794857676 |
| PubMed_21979375_A2 | Up | 0.0627465130 |
| GSE35957 | Down | -0.2311335636 |
| GSE36640 | Down | -0.3235025419 |
| GSE54402 | Down | -0.1983317258 |
| GSE9593 | Down | -0.4204186287 |
| GSE43922 | Up | 0.0536872489 |
| GSE24585 | Up | 0.5077080994 |
| GSE37065 | Up | 0.0221227072 |
| GSE28863_A1 | Up | 0.6365642363 |
| GSE28863_A2 | Up | 0.3509537402 |
| GSE28863_A3 | Down | -0.5501609736 |
| GSE28863_A4 | Up | 0.3190173286 |
| GSE48662 | Down | -0.2439444138 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020883 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040591 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041706 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045993 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
