HCSGD entry for WBP11
1. General information
| Official gene symbol | WBP11 |
|---|---|
| Entrez ID | 51729 |
| Gene full name | WW domain binding protein 11 |
| Other gene symbols | NPWBP SIPP1 WBP-11 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003697 | Single-stranded DNA binding | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | TAS | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006364 | RRNA processing | IEA | biological_process |
| GO:0006396 | RNA processing | IEA | biological_process |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008380 | RNA splicing | IEA | biological_process |
| GO:0008599 | Protein phosphatase type 1 regulator activity | IEA | molecular_function |
| GO:0016607 | Nuclear speck | IEA | cellular_component |
| GO:0050699 | WW domain binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7465242392 | 0.4266204058 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0138859151 |
| GSE13712_SHEAR | Down | -0.1526512382 |
| GSE13712_STATIC | Down | -0.1794127917 |
| GSE19018 | Down | -0.0057928226 |
| GSE19899_A1 | Down | -0.0523532243 |
| GSE19899_A2 | Down | -0.0809428688 |
| PubMed_21979375_A1 | Up | 0.2638906500 |
| PubMed_21979375_A2 | Up | 0.3543993135 |
| GSE35957 | Down | -0.0296872336 |
| GSE36640 | Down | -0.5669580504 |
| GSE54402 | Up | 0.0328854819 |
| GSE9593 | Up | 0.0194959015 |
| GSE43922 | Down | -0.0413214408 |
| GSE24585 | Up | 0.1076875920 |
| GSE37065 | Up | 0.1177507342 |
| GSE28863_A1 | Up | 0.2671851213 |
| GSE28863_A2 | Up | 0.0384988446 |
| GSE28863_A3 | Up | 0.0752809794 |
| GSE28863_A4 | Down | -0.1413454752 |
| GSE48662 | Down | -0.3181570014 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025244 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027410 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031437 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037321 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051869 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052331 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
