HCSGD entry for MPP6
1. General information
| Official gene symbol | MPP6 |
|---|---|
| Entrez ID | 51678 |
| Gene full name | membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) |
| Other gene symbols | PALS2 VAM-1 VAM1 p55T |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006461 | Protein complex assembly | NAS | biological_process |
| GO:0016020 | Membrane | NAS | cellular_component |
| GO:0030165 | PDZ domain binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7290460545 | 0.0261656434 | 0.9999902473 | 0.3100882035 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.7854164187 |
| GSE13712_SHEAR | Up | 0.0595088147 |
| GSE13712_STATIC | Down | -0.1133635340 |
| GSE19018 | Down | -0.3957350643 |
| GSE19899_A1 | Up | 0.0598924886 |
| GSE19899_A2 | Down | -0.0943227536 |
| PubMed_21979375_A1 | Up | 0.9803539439 |
| PubMed_21979375_A2 | Up | 0.5712057738 |
| GSE35957 | Down | -0.3274058143 |
| GSE36640 | Down | -0.7414350788 |
| GSE54402 | Down | -0.2988638160 |
| GSE9593 | Down | -0.1701256788 |
| GSE43922 | Up | 0.0088098174 |
| GSE24585 | Down | -0.5626543960 |
| GSE37065 | Down | -0.3675690100 |
| GSE28863_A1 | Up | 0.2447866021 |
| GSE28863_A2 | Up | 0.4673805396 |
| GSE28863_A3 | Down | -0.6504484111 |
| GSE28863_A4 | Down | -0.0541253577 |
| GSE48662 | Down | -0.4809009256 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT048065 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050347 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
