HCSGD entry for ZFR
1. General information
| Official gene symbol | ZFR |
|---|---|
| Entrez ID | 51663 |
| Gene full name | zinc finger RNA binding protein |
| Other gene symbols | ZFR1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005694 | Chromosome | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1704951484 | 0.8384307549 | 0.8126770735 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1580884618 |
| GSE13712_SHEAR | Up | 0.1668687725 |
| GSE13712_STATIC | Down | -0.1017850427 |
| GSE19018 | Down | -0.1620142146 |
| GSE19899_A1 | Down | -0.0361407101 |
| GSE19899_A2 | Down | -0.2349110802 |
| PubMed_21979375_A1 | Up | 0.7393805693 |
| PubMed_21979375_A2 | Up | 0.4308857631 |
| GSE35957 | Up | 0.2776384158 |
| GSE36640 | Up | 0.2687207461 |
| GSE54402 | Up | 0.1482272465 |
| GSE9593 | Up | 0.5611743500 |
| GSE43922 | Down | -0.0814025971 |
| GSE24585 | Up | 0.1342029538 |
| GSE37065 | Up | 0.1082652860 |
| GSE28863_A1 | Up | 0.1715856938 |
| GSE28863_A2 | Down | -0.0430703056 |
| GSE28863_A3 | Down | -0.1703834410 |
| GSE28863_A4 | Down | -0.2373958945 |
| GSE48662 | Up | 0.1336626880 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025344 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-484 | MIMAT0002174 | MIRT041922 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
