HCSGD entry for FAM49B
1. General information
| Official gene symbol | FAM49B |
|---|---|
| Entrez ID | 51571 |
| Gene full name | family with sequence similarity 49, member B |
| Other gene symbols | L1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005929 | Cilium | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9908899852 | 0.0361640021 | 0.9999902473 | 0.3581466717 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1514125794 |
| GSE13712_SHEAR | Up | 0.0635481577 |
| GSE13712_STATIC | Down | -0.0505663137 |
| GSE19018 | Down | -0.1701121633 |
| GSE19899_A1 | Up | 0.1155071792 |
| GSE19899_A2 | Down | -0.4139676255 |
| PubMed_21979375_A1 | Down | -0.4795231773 |
| PubMed_21979375_A2 | Up | 0.0073048056 |
| GSE35957 | Down | -0.1856137086 |
| GSE36640 | Down | -0.6180687952 |
| GSE54402 | Down | -0.1825529740 |
| GSE9593 | Down | -0.3362750491 |
| GSE43922 | Down | -0.0056489873 |
| GSE24585 | Down | -0.1246368274 |
| GSE37065 | Up | 0.0314886120 |
| GSE28863_A1 | Down | -0.4047536937 |
| GSE28863_A2 | Down | -0.1656002660 |
| GSE28863_A3 | Down | -0.6126490538 |
| GSE28863_A4 | Up | 0.0835883694 |
| GSE48662 | Down | -0.4092577542 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-590-3p | MIMAT0004801 | MIRT016165 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021970 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-27a-3p | MIMAT0000084 | MIRT028701 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029477 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032366 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-769-5p | MIMAT0003886 | MIRT039184 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
