HCSGD entry for RAB6B

1. General information

Official gene symbolRAB6B
Entrez ID51560
Gene full nameRAB6B, member RAS oncogene family
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneIEAcellular_component
GO:0003924GTPase activityNASmolecular_function
GO:0005525GTP bindingIEAmolecular_function
GO:0005794Golgi apparatusNAScellular_component
GO:0006184GTP catabolic processNASbiological_process
GO:0006890Retrograde vesicle-mediated transport, Golgi to ERNASbiological_process
GO:0007264Small GTPase mediated signal transductionIEAbiological_process
GO:0008152Metabolic processNASbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0016023Cytoplasmic membrane-bounded vesicleIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00758165340.98806747080.22701568181.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0220136223
GSE13712_SHEARDown-0.4835575165
GSE13712_STATICUp0.3879969534
GSE19018Up0.2956140008
GSE19899_A1Up0.1877872074
GSE19899_A2Up1.0128979083
PubMed_21979375_A1Up1.6936275552
PubMed_21979375_A2Up0.7156396416
GSE35957Up0.5032652244
GSE36640Up1.8810134076
GSE54402Up0.1105687087
GSE9593Up0.4488038094
GSE43922Up0.1981546568
GSE24585Up0.3036237083
GSE37065Down-0.1777376339
GSE28863_A1Down-0.2434595389
GSE28863_A2Up0.4865797990
GSE28863_A3Up0.1723287969
GSE28863_A4Up0.0035968119
GSE48662Up0.4543542283

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-122-5pMIMAT0000421MIRT003086Luciferase reporter assay//qRT-PCRFunctional MTI19296470
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.