HCSGD entry for VTA1

1. General information

Official gene symbolVTA1
Entrez ID51534
Gene full nameVps20-associated 1 homolog (S. cerevisiae)
Other gene symbolsC6orf55 DRG-1 DRG1 LIP5 My012 SBP1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005829CytosolTAScellular_component
GO:0010008Endosome membraneIEAcellular_component
GO:0015031Protein transportIEAbiological_process
GO:0016032Viral processTASbiological_process
GO:0016197Endosomal transportTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.96816341320.07241164090.99999024730.5069245745

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0063248575
GSE13712_SHEARDown-0.1717022153
GSE13712_STATICDown-0.0142716828
GSE19018Up0.0200760973
GSE19899_A1Down-0.0250611526
GSE19899_A2Down-0.2519434918
PubMed_21979375_A1Up0.3058319484
PubMed_21979375_A2Down-0.3627095683
GSE35957Up0.0893504600
GSE36640Down-0.0390628533
GSE54402Down-0.0165005711
GSE9593Down-0.0688000070
GSE43922Down-0.1577488684
GSE24585Down-0.4552896923
GSE37065Up0.0569799706
GSE28863_A1Up0.0428173364
GSE28863_A2Up0.0220702978
GSE28863_A3Down-0.6314290657
GSE28863_A4Down-0.2575764907
GSE48662Down-0.4805922978

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.