HCSGD entry for CXXC5
1. General information
| Official gene symbol | CXXC5 |
|---|---|
| Entrez ID | 51523 |
| Gene full name | CXXC finger protein 5 |
| Other gene symbols | CF5 RINF WID |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0004871 | Signal transducer activity | IMP | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007165 | Signal transduction | IMP | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0043123 | Positive regulation of I-kappaB kinase/NF-kappaB signaling | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6987499297 | 0.0018753239 | 0.9999902473 | 0.0833790541 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3698032179 |
| GSE13712_SHEAR | Down | -2.6696627957 |
| GSE13712_STATIC | Down | -1.6556390615 |
| GSE19018 | Down | -0.0584751170 |
| GSE19899_A1 | Down | -0.3403164729 |
| GSE19899_A2 | Down | -1.7224205415 |
| PubMed_21979375_A1 | Down | -1.3005590866 |
| PubMed_21979375_A2 | Down | -1.2284418312 |
| GSE35957 | Down | -0.5006401487 |
| GSE36640 | Up | 1.2729810929 |
| GSE54402 | Down | -1.0529217528 |
| GSE9593 | Up | 0.1055865125 |
| GSE43922 | Down | -0.6926945469 |
| GSE24585 | Up | 0.6299396943 |
| GSE37065 | Down | -0.0766345834 |
| GSE28863_A1 | Up | 0.3700229152 |
| GSE28863_A2 | Up | 0.3006522496 |
| GSE28863_A3 | Down | -0.7149995147 |
| GSE28863_A4 | Down | -0.2806398465 |
| GSE48662 | Up | 0.3715658831 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021344 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT043013 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
