HCSGD entry for NOP16
1. General information
| Official gene symbol | NOP16 |
|---|---|
| Entrez ID | 51491 |
| Gene full name | NOP16 nucleolar protein |
| Other gene symbols | HSPC111 HSPC185 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0228015729 | 0.0788126249 | 0.3606136091 | 0.5313689964 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4444972619 |
| GSE13712_SHEAR | Up | 0.3735730456 |
| GSE13712_STATIC | Up | 0.3651042825 |
| GSE19018 | Down | -1.4039596653 |
| GSE19899_A1 | Up | 0.6114345382 |
| GSE19899_A2 | Up | 0.9197044293 |
| PubMed_21979375_A1 | Up | 1.9476039136 |
| PubMed_21979375_A2 | Up | 0.5795999983 |
| GSE35957 | Up | 0.0471731177 |
| GSE36640 | Down | -0.2838582111 |
| GSE54402 | Up | 0.8059324033 |
| GSE9593 | Down | -0.2686425505 |
| GSE43922 | Up | 0.8144743263 |
| GSE24585 | Down | -1.0130792217 |
| GSE37065 | Down | -0.1081349481 |
| GSE28863_A1 | Down | -0.3362210048 |
| GSE28863_A2 | Down | -0.1485585261 |
| GSE28863_A3 | Down | -0.1849710328 |
| GSE28863_A4 | Down | -0.2733993628 |
| GSE48662 | Down | -0.4074433624 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125a-5p | MIMAT0000443 | MIRT021296 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT025600 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
