HCSGD entry for SFMBT1
1. General information
| Official gene symbol | SFMBT1 |
|---|---|
| Entrez ID | 51460 |
| Gene full name | Scm-like with four mbt domains 1 |
| Other gene symbols | RU1 SFMBT |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003714 | Transcription corepressor activity | TAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0016568 | Chromatin modification | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0042393 | Histone binding | IDA | molecular_function |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IDA IMP | biological_process |
| GO:0048635 | Negative regulation of muscle organ development | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2740921735 | 0.3041417537 | 0.9704573715 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0242396241 |
| GSE13712_SHEAR | Up | 0.2479738911 |
| GSE13712_STATIC | Up | 0.3523527828 |
| GSE19018 | Down | -0.1701637630 |
| GSE19899_A1 | Up | 0.0813756772 |
| GSE19899_A2 | Up | 0.0252508035 |
| PubMed_21979375_A1 | Down | -0.0723298192 |
| PubMed_21979375_A2 | Down | -0.2954457220 |
| GSE35957 | Down | -0.3489010566 |
| GSE36640 | Down | -1.2349118613 |
| GSE54402 | Up | 0.0014988112 |
| GSE9593 | Down | -0.0272465614 |
| GSE43922 | Down | -0.2810433584 |
| GSE24585 | Up | 0.2809082684 |
| GSE37065 | Up | 0.2383521571 |
| GSE28863_A1 | Up | 0.7185693707 |
| GSE28863_A2 | Up | 0.7449625341 |
| GSE28863_A3 | Down | -0.4187263015 |
| GSE28863_A4 | Down | -0.0239698436 |
| GSE48662 | Down | -0.0323730851 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029891 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26a-5p | MIMAT0000082 | MIRT050135 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052054 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
