HCSGD entry for SCARA3
1. General information
| Official gene symbol | SCARA3 |
|---|---|
| Entrez ID | 51435 |
| Gene full name | scavenger receptor class A, member 3 |
| Other gene symbols | APC7 CSR CSR1 MSLR1 MSRL1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005044 | Scavenger receptor activity | TAS | molecular_function |
| GO:0005581 | Collagen | IEA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006898 | Receptor-mediated endocytosis | TAS | biological_process |
| GO:0006979 | Response to oxidative stress | TAS | biological_process |
| GO:0009650 | UV protection | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9948866456 | 0.0000457391 | 0.9999902473 | 0.0114692982 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1120946071 |
| GSE13712_SHEAR | Down | -1.8002891055 |
| GSE13712_STATIC | Down | -1.7313847513 |
| GSE19018 | Down | -0.4308288945 |
| GSE19899_A1 | Down | -0.8500530431 |
| GSE19899_A2 | Down | -3.2080064937 |
| PubMed_21979375_A1 | Down | -2.3855736193 |
| PubMed_21979375_A2 | Down | -3.6602579121 |
| GSE35957 | Down | -1.9126498757 |
| GSE36640 | Down | -3.2464661593 |
| GSE54402 | Down | -0.8057893709 |
| GSE9593 | Down | -1.0589827778 |
| GSE43922 | Down | -1.7186839944 |
| GSE24585 | Down | -0.2817674266 |
| GSE37065 | Up | 0.1856499321 |
| GSE28863_A1 | Up | 0.5075529496 |
| GSE28863_A2 | Up | 0.3925343970 |
| GSE28863_A3 | Down | -0.3313399606 |
| GSE28863_A4 | Down | -0.3385351727 |
| GSE48662 | Down | -0.7405072623 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030128 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040380 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
