HCSGD entry for SNX7
1. General information
| Official gene symbol | SNX7 |
|---|---|
| Entrez ID | 51375 |
| Gene full name | sorting nexin 7 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0007154 | Cell communication | IEA | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0030659 | Cytoplasmic vesicle membrane | IEA | cellular_component |
| GO:0035091 | Phosphatidylinositol binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9946233426 | 0.0020024277 | 0.9999902473 | 0.0854228525 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0945321480 |
| GSE13712_SHEAR | Down | -0.0623801052 |
| GSE13712_STATIC | Up | 0.0216215652 |
| GSE19018 | Up | 0.3572667325 |
| GSE19899_A1 | Down | -2.9719050257 |
| GSE19899_A2 | Down | -1.4714988050 |
| PubMed_21979375_A1 | Down | -1.8177126766 |
| PubMed_21979375_A2 | Down | -1.7595938540 |
| GSE35957 | Down | -0.2053178448 |
| GSE36640 | Down | -0.4654263984 |
| GSE54402 | Down | -0.9107269160 |
| GSE9593 | Down | -0.1084619279 |
| GSE43922 | Down | -1.1005776928 |
| GSE24585 | Down | -0.3071459452 |
| GSE37065 | Down | -0.0892478334 |
| GSE28863_A1 | Down | -0.1057211242 |
| GSE28863_A2 | Up | 0.0308371460 |
| GSE28863_A3 | Down | -0.3919997344 |
| GSE28863_A4 | Down | -0.1359292278 |
| GSE48662 | Down | -0.2976516418 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021387 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT021836 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022637 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043181 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT048715 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
