HCSGD entry for SCAND1
1. General information
| Official gene symbol | SCAND1 |
|---|---|
| Entrez ID | 51282 |
| Gene full name | SCAN domain containing 1 |
| Other gene symbols | RAZ1 SDP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000981 | Sequence-specific DNA binding RNA polymerase II transcription factor activity | IBA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | ISS | molecular_function |
| GO:0003713 | Transcription coactivator activity | IBA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0006366 | Transcription from RNA polymerase II promoter | IBA | biological_process |
| GO:0042802 | Identical protein binding | ISS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0417168953 | 0.9152460279 | 0.4574625311 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.7530844538 |
| GSE13712_SHEAR | Up | 0.0783395881 |
| GSE13712_STATIC | Up | 0.1019140025 |
| GSE19018 | Down | -0.0380200868 |
| GSE19899_A1 | Up | 0.3278163880 |
| GSE19899_A2 | Up | 1.1380414473 |
| PubMed_21979375_A1 | Up | 0.8754432182 |
| PubMed_21979375_A2 | Up | 0.5237565681 |
| GSE35957 | Down | -0.2140746697 |
| GSE36640 | Up | 0.0204205018 |
| GSE54402 | Up | 0.1690640415 |
| GSE9593 | Down | -0.1839636142 |
| GSE43922 | Up | 0.1677687124 |
| GSE24585 | Up | 0.0722507853 |
| GSE37065 | Down | -0.0941611519 |
| GSE28863_A1 | Down | -0.0817963124 |
| GSE28863_A2 | Down | -0.3607157941 |
| GSE28863_A3 | Up | 0.1779138688 |
| GSE28863_A4 | Down | -0.0059069982 |
| GSE48662 | Up | 0.3213356720 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
