HCSGD entry for SHISA5
1. General information
| Official gene symbol | SHISA5 |
|---|---|
| Entrez ID | 51246 |
| Gene full name | shisa homolog 5 (Xenopus laevis) |
| Other gene symbols | SCOTIN |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004871 | Signal transducer activity | IMP | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005635 | Nuclear envelope | IEA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IEA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031965 | Nuclear membrane | IEA | cellular_component |
| GO:0042771 | Intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator | IEA | biological_process |
| GO:0043123 | Positive regulation of I-kappaB kinase/NF-kappaB signaling | IMP | biological_process |
| GO:0050699 | WW domain binding | IPI | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0545064777 | 0.9284908970 | 0.5096500888 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4517465461 |
| GSE13712_SHEAR | Up | 0.5757204751 |
| GSE13712_STATIC | Up | 0.5622617629 |
| GSE19018 | Up | 0.1873263225 |
| GSE19899_A1 | Down | -0.0673453147 |
| GSE19899_A2 | Up | 0.7207882587 |
| PubMed_21979375_A1 | Up | 0.1840687516 |
| PubMed_21979375_A2 | Up | 0.9301050471 |
| GSE35957 | Down | -0.4375232251 |
| GSE36640 | Up | 0.7092701895 |
| GSE54402 | Down | -0.4068302343 |
| GSE9593 | Up | 0.0592294318 |
| GSE43922 | Down | -0.0150533987 |
| GSE24585 | Up | 0.1069063552 |
| GSE37065 | Up | 0.1487282876 |
| GSE28863_A1 | Up | 0.1164960916 |
| GSE28863_A2 | Up | 0.2470183877 |
| GSE28863_A3 | Down | -0.0365012918 |
| GSE28863_A4 | Down | -0.0847672907 |
| GSE48662 | Up | 0.1673925152 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025901 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-1296-5p | MIMAT0005794 | MIRT036083 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037247 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT048940 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
