HCSGD entry for CHMP1A

1. General information

Official gene symbolCHMP1A
Entrez ID5119
Gene full namecharged multivesicular body protein 1A
Other gene symbolsCHMP1 PCH8 PCOLN3 PRSM1 VPS46-1 VPS46A
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000794Condensed nuclear chromosomeIDAcellular_component
GO:0000910CytokinesisIMPbiological_process
GO:0005515Protein bindingIPImolecular_function
GO:0005769Early endosomeIDAcellular_component
GO:0005815Microtubule organizing centerIDAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0007076Mitotic chromosome condensationIDAbiological_process
GO:0008237Metallopeptidase activityTASmolecular_function
GO:0008270Zinc ion bindingTASmolecular_function
GO:0010008Endosome membraneIEAcellular_component
GO:0012505Endomembrane systemIDAcellular_component
GO:0015031Protein transportIEAbiological_process
GO:0016192Vesicle-mediated transportIDAbiological_process
GO:0016363Nuclear matrixIDAcellular_component
GO:0016458Gene silencingIDAbiological_process
GO:0019904Protein domain specific bindingIPImolecular_function
GO:0045014Negative regulation of transcription by glucoseIDAbiological_process
GO:0045892Negative regulation of transcription, DNA-templatedIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.64244346720.29494938640.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0516887402
GSE13712_SHEARDown-0.0299268487
GSE13712_STATICDown-0.0665518304
GSE19018Down-0.2438354423
GSE19899_A1Down-0.2123105689
GSE19899_A2Up0.3827980006
PubMed_21979375_A1Up0.4025008395
PubMed_21979375_A2Up0.4299360682
GSE35957Down-0.0409365960
GSE36640Down-0.1800033548
GSE54402Up0.1698355310
GSE9593Down-0.1198201635
GSE43922Up0.0040461525
GSE24585Down-0.0826328280
GSE37065Down-0.1983624351
GSE28863_A1Down-0.1644647333
GSE28863_A2Up0.0062170880
GSE28863_A3Down-0.5764974968
GSE28863_A4Up0.0272702717
GSE48662Up0.4151750288

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.