HCSGD entry for SAR1B
1. General information
| Official gene symbol | SAR1B |
|---|---|
| Entrez ID | 51128 |
| Gene full name | SAR1 homolog B (S. cerevisiae) |
| Other gene symbols | ANDD CMRD GTBPB SARA2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002474 | Antigen processing and presentation of peptide antigen via MHC class I | TAS | biological_process |
| GO:0003924 | GTPase activity | TAS | molecular_function |
| GO:0005525 | GTP binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IDA IEA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | TAS | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006184 | GTP catabolic process | TAS | biological_process |
| GO:0006886 | Intracellular protein transport | IEA | biological_process |
| GO:0006888 | ER to Golgi vesicle-mediated transport | TAS | biological_process |
| GO:0012507 | ER to Golgi transport vesicle membrane | TAS | cellular_component |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0019886 | Antigen processing and presentation of exogenous peptide antigen via MHC class II | TAS | biological_process |
| GO:0032580 | Golgi cisterna membrane | IEA | cellular_component |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0048208 | COPII vesicle coating | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2450106645 | 0.6464194825 | 0.9335445426 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4347510539 |
| GSE13712_SHEAR | Down | -0.0230947976 |
| GSE13712_STATIC | Up | 0.2024922224 |
| GSE19018 | Down | -0.4381433828 |
| GSE19899_A1 | Up | 0.1200688418 |
| GSE19899_A2 | Down | -0.3021281814 |
| PubMed_21979375_A1 | Down | -0.1625123156 |
| PubMed_21979375_A2 | Up | 0.1649670603 |
| GSE35957 | Up | 0.2435594331 |
| GSE36640 | Up | 0.6914513810 |
| GSE54402 | Down | -0.0529319776 |
| GSE9593 | Down | -0.1397706687 |
| GSE43922 | Down | -0.0280239490 |
| GSE24585 | Up | 0.3560535646 |
| GSE37065 | Up | 0.1585033881 |
| GSE28863_A1 | Up | 0.1905964227 |
| GSE28863_A2 | Up | 0.3354643101 |
| GSE28863_A3 | Down | -0.4138509091 |
| GSE28863_A4 | Down | -0.1296797433 |
| GSE48662 | Down | -0.1411741611 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Guanosine-5'-Diphosphate | DB04315 | EXPT01573 |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-423-5p | MIMAT0004748 | MIRT038111 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048276 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
