HCSGD entry for NMD3
1. General information
| Official gene symbol | NMD3 |
|---|---|
| Entrez ID | 51068 |
| Gene full name | NMD3 homolog (S. cerevisiae) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | IEA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1526177273 | 0.7798900118 | 0.7798500872 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0576376109 |
| GSE13712_SHEAR | Up | 0.0425850242 |
| GSE13712_STATIC | Up | 0.3202195209 |
| GSE19018 | Up | 0.1192641968 |
| GSE19899_A1 | Up | 0.3823094656 |
| GSE19899_A2 | Up | 0.2186230181 |
| PubMed_21979375_A1 | Up | 0.7132418581 |
| PubMed_21979375_A2 | Up | 0.1266212590 |
| GSE35957 | Down | -0.0857707299 |
| GSE36640 | Up | 0.2321092359 |
| GSE54402 | Up | 0.1106346980 |
| GSE9593 | Down | -0.2677637863 |
| GSE43922 | Up | 0.0342188871 |
| GSE24585 | Down | -0.0603045567 |
| GSE37065 | Down | -0.1274459416 |
| GSE28863_A1 | Up | 0.2646607377 |
| GSE28863_A2 | Up | 0.1269960213 |
| GSE28863_A3 | Up | 0.0820770538 |
| GSE28863_A4 | Down | -0.0501165603 |
| GSE48662 | Down | -0.7978657059 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016413 | Proteomics | Functional MTI (Weak) | 21512034 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020746 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029457 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038012 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042015 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT048972 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051243 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
