HCSGD entry for UBXN1


1. General information

Official gene symbolUBXN1
Entrez ID51035
Gene full nameUBX domain protein 1
Other gene symbols2B28 SAKS1 UBXD10
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000502Proteasome complexIDAcellular_component
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIEAcellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0030425DendriteIEAcellular_component
GO:0031397Negative regulation of protein ubiquitinationIDAbiological_process
GO:0031593Polyubiquitin bindingIDAmolecular_function
GO:0031625Ubiquitin protein ligase bindingIDAmolecular_function
GO:0032435Negative regulation of proteasomal ubiquitin-dependent protein catabolic processIDAbiological_process
GO:0034098Cdc48p-Npl4p-Ufd1p AAA ATPase complexIDAcellular_component
GO:0043025Neuronal cell bodyIEAcellular_component
GO:0043130Ubiquitin bindingIDAmolecular_function
GO:0043161Proteasome-mediated ubiquitin-dependent protein catabolic processNASbiological_process
GO:0051117ATPase bindingIPImolecular_function
GO:0071796K6-linked polyubiquitin bindingIDAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.62076568900.30068228030.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.3196392342
GSE13712_SHEARDown-0.2481592924
GSE13712_STATICDown-0.2653912513
GSE19018Up0.1747129793
GSE19899_A1Down-0.0988727423
GSE19899_A2Up0.0389205494
PubMed_21979375_A1Down-0.4297851920
PubMed_21979375_A2Up0.1083003419
GSE35957Down-0.3340727533
GSE36640Down-0.2258105560
GSE54402Up0.2240490662
GSE9593Up0.1353256064
GSE43922Up0.0184245428
GSE24585Down-0.0059098098
GSE37065Down-0.0737243630
GSE28863_A1Down-0.2393363001
GSE28863_A2Down-0.5829259074
GSE28863_A3Up0.2988422825
GSE28863_A4Up0.2592578475
GSE48662Up0.0018053294

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-373-3pMIMAT0000726MIRT003817MicroarrayFunctional MTI (Weak)15685193
hsa-miR-155-5pMIMAT0000646MIRT020578ProteomicsFunctional MTI (Weak)18668040
hsa-miR-615-3pMIMAT0003283MIRT040124CLASHFunctional MTI (Weak)23622248
hsa-miR-30e-3pMIMAT0000693MIRT044114CLASHFunctional MTI (Weak)23622248
hsa-miR-27b-3pMIMAT0000419MIRT046169CLASHFunctional MTI (Weak)23622248
hsa-miR-30c-5pMIMAT0000244MIRT047839CLASHFunctional MTI (Weak)23622248
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  • mirRecord

MicroRNA name

mirBase ID

Target site number

MiRNA mature ID

Test method inter

MiRNA regulation site

Reporter target site

Pubmed ID

hsa-miR-373-3pMIMAT0000726NAhsa-miR-37315685193
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6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.