HCSGD entry for TVP23B
1. General information
| Official gene symbol | TVP23B |
|---|---|
| Entrez ID | 51030 |
| Gene full name | trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) |
| Other gene symbols | FAM18B FAM18B1 NPD008 YDR084C |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0187073819 | 0.9957936097 | 0.3344564834 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0973003107 |
| GSE13712_SHEAR | Up | 0.4673737453 |
| GSE13712_STATIC | Up | 0.4773258863 |
| GSE19018 | Up | 0.3111684625 |
| GSE19899_A1 | Up | 0.4995776965 |
| GSE19899_A2 | Up | 0.5342227085 |
| PubMed_21979375_A1 | Up | 0.3325383670 |
| PubMed_21979375_A2 | Up | 0.5400728014 |
| GSE35957 | Up | 0.2067587203 |
| GSE36640 | Up | 1.0055410121 |
| GSE54402 | Up | 0.0317089481 |
| GSE9593 | Up | 0.0777552578 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.1734226264 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-25-3p | MIMAT0000081 | MIRT050260 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
