HCSGD entry for CCDC53

1. General information

Official gene symbolCCDC53
Entrez ID51019
Gene full namecoiled-coil domain containing 53
Other gene symbolsCGI-116
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0008150Biological_processNDbiological_process
GO:0071203WASH complexIDA IEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.72164133580.01166342080.99999024730.2131895139

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0342170620
GSE13712_SHEARUp0.0404560846
GSE13712_STATICDown-0.1019534780
GSE19018Up0.7065300481
GSE19899_A1Down-1.6024748524
GSE19899_A2Down-0.9705509003
PubMed_21979375_A1Down-2.2847929688
PubMed_21979375_A2Down-1.6082713208
GSE35957Down-0.3689739315
GSE36640Down-0.4923787404
GSE54402Down-0.2544291336
GSE9593Up0.2605564034
GSE43922Down-1.1068307157
GSE24585Up0.1169760306
GSE37065Down-0.2404099449
GSE28863_A1Up0.4074511094
GSE28863_A2Up0.1809229364
GSE28863_A3Up0.0096156695
GSE28863_A4Down-0.0719303384
GSE48662Up0.0852119943

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-26b-5pMIMAT0000083MIRT030138MicroarrayFunctional MTI (Weak)19088304
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.