HCSGD entry for TMED5


1. General information

Official gene symbolTMED5
Entrez ID50999
Gene full nametransmembrane emp24 protein transport domain containing 5
Other gene symbolsCGI-100 p28
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005789Endoplasmic reticulum membraneIEAcellular_component
GO:0005793Endoplasmic reticulum-Golgi intermediate compartmentIDAcellular_component
GO:0005794Golgi apparatusIEAcellular_component
GO:0005801Cis-Golgi networkIDAcellular_component
GO:0006810TransportIEAbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0033116Endoplasmic reticulum-Golgi intermediate compartment membraneIEAcellular_component
GO:0070971Endoplasmic reticulum exit siteIDAcellular_component
GO:0090161Golgi ribbon formationIMPbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.21022344900.85313993390.88334792461.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1161764420
GSE13712_SHEARUp0.2662032197
GSE13712_STATICUp0.3008649838
GSE19018Down-0.0176117134
GSE19899_A1Up0.1177301952
GSE19899_A2Up0.1871942423
PubMed_21979375_A1Up0.5696205403
PubMed_21979375_A2Up0.1398468509
GSE35957Down-0.2341856856
GSE36640Up0.1571537432
GSE54402Up0.0195822256
GSE9593Down-0.0757714623
GSE43922Up0.2149965810
GSE24585Up0.0049201312
GSE37065Up0.3932589093
GSE28863_A1Up0.0939157844
GSE28863_A2Up0.4411512425
GSE28863_A3Down-0.5116333064
GSE28863_A4Down-0.3167308322
GSE48662Down-0.1037009135

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-375MIMAT0000728MIRT019961MicroarrayFunctional MTI (Weak)20215506
hsa-miR-30a-5pMIMAT0000087MIRT028593ProteomicsFunctional MTI (Weak)18668040
hsa-miR-26b-5pMIMAT0000083MIRT029986MicroarrayFunctional MTI (Weak)19088304
hsa-let-7b-5pMIMAT0000063MIRT032422ProteomicsFunctional MTI (Weak)18668040
hsa-miR-652-3pMIMAT0003322MIRT039509CLASHFunctional MTI (Weak)23622248
hsa-miR-301a-3pMIMAT0000688MIRT044231CLASHFunctional MTI (Weak)23622248
hsa-miR-30b-5pMIMAT0000420MIRT046138CLASHFunctional MTI (Weak)23622248
Entries Per Page
Displaying Page of
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.