HCSGD entry for PCDHGC3
1. General information
| Official gene symbol | PCDHGC3 |
|---|---|
| Entrez ID | 5098 |
| Gene full name | protocadherin gamma subfamily C, 3 |
| Other gene symbols | PC43 PCDH-GAMMA-C3 PCDH2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016020 | Membrane | NAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016339 | Calcium-dependent cell-cell adhesion | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9008144865 | 0.4795078834 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1171260260 |
| GSE13712_SHEAR | Up | 0.2734788662 |
| GSE13712_STATIC | Up | 0.0573060523 |
| GSE19018 | Down | -0.0020700109 |
| GSE19899_A1 | Down | -0.0128642285 |
| GSE19899_A2 | Down | -0.1075283923 |
| PubMed_21979375_A1 | Down | -0.4430357412 |
| PubMed_21979375_A2 | Down | -0.2457727984 |
| GSE35957 | Up | 0.1310664469 |
| GSE36640 | Down | -0.1820423808 |
| GSE54402 | Down | -0.0586364334 |
| GSE9593 | Up | 0.2561791215 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.0262725505 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018124 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
