HCSGD entry for F11R
1. General information
| Official gene symbol | F11R |
|---|---|
| Entrez ID | 50848 |
| Gene full name | F11 receptor |
| Other gene symbols | CD321 JAM JAM1 JAMA JCAM KAT PAM-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005886 | Plasma membrane | IDA TAS | cellular_component |
| GO:0005911 | Cell-cell junction | TAS | cellular_component |
| GO:0005923 | Tight junction | IEA | cellular_component |
| GO:0006954 | Inflammatory response | TAS | biological_process |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0007179 | Transforming growth factor beta receptor signaling pathway | TAS | biological_process |
| GO:0007596 | Blood coagulation | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0030054 | Cell junction | TAS | cellular_component |
| GO:0030855 | Epithelial cell differentiation | IEA | biological_process |
| GO:0034329 | Cell junction assembly | TAS | biological_process |
| GO:0045216 | Cell-cell junction organization | TAS | biological_process |
| GO:0050900 | Leukocyte migration | TAS | biological_process |
| GO:0070830 | Tight junction assembly | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0102355078 | 0.9867580791 | 0.2575609943 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2066858860 |
| GSE13712_SHEAR | Down | -0.1885072023 |
| GSE13712_STATIC | Down | -0.1181557005 |
| GSE19018 | Up | 1.0702849934 |
| GSE19899_A1 | Up | 0.2616190432 |
| GSE19899_A2 | Up | 1.8657062532 |
| PubMed_21979375_A1 | Up | 1.6216580034 |
| PubMed_21979375_A2 | Up | 1.6561413828 |
| GSE35957 | Up | 0.2157071497 |
| GSE36640 | Up | 0.0880920469 |
| GSE54402 | Up | 0.0338240589 |
| GSE9593 | Up | 0.0656580224 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.2208433004 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002678 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002678 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT019092 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-145-5p | MIMAT0000437 | MIRT021501 | Reporter assay | Functional MTI | 20818426 |
| hsa-miR-145-5p | MIMAT0000437 | MIRT021501 | Reporter assay;Microarray | Functional MTI | 21351259 |
| hsa-miR-1 | MIMAT0000416 | MIRT024072 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
