HCSGD entry for COPS7A
1. General information
| Official gene symbol | COPS7A |
|---|---|
| Entrez ID | 50813 |
| Gene full name | COP9 signalosome subunit 7A |
| Other gene symbols | CSN7A |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA IEA | cellular_component |
| GO:0008180 | COP9 signalosome | IDA IEA | cellular_component |
| GO:0010388 | Cullin deneddylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2012523916 | 0.6599238973 | 0.8652669389 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3277219661 |
| GSE13712_SHEAR | Down | -0.0281561065 |
| GSE13712_STATIC | Up | 0.0645261233 |
| GSE19018 | Up | 0.5546083125 |
| GSE19899_A1 | Down | -0.3243040337 |
| GSE19899_A2 | Down | -0.0548776256 |
| PubMed_21979375_A1 | Up | 0.6364096824 |
| PubMed_21979375_A2 | Down | -0.5534511541 |
| GSE35957 | Up | 0.0448413931 |
| GSE36640 | Up | 0.8216179291 |
| GSE54402 | Up | 0.0441655277 |
| GSE9593 | Up | 0.2341282030 |
| GSE43922 | Down | -0.1914959764 |
| GSE24585 | Up | 0.0409534972 |
| GSE37065 | Down | -0.1838806561 |
| GSE28863_A1 | Up | 0.0777962421 |
| GSE28863_A2 | Up | 0.0804952681 |
| GSE28863_A3 | Down | -0.2896693964 |
| GSE28863_A4 | Up | 0.1250139037 |
| GSE48662 | Up | 0.2220445550 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024503 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026890 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030594 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038117 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-361-5p | MIMAT0000703 | MIRT044110 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30d-5p | MIMAT0000245 | MIRT047795 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-107 | MIMAT0000104 | MIRT048306 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
