HCSGD entry for DEF6

1. General information

Official gene symbolDEF6
Entrez ID50619
Gene full namedifferentially expressed in FDCP 6 homolog (mouse)
Other gene symbolsIBP SLAT SWAP70L
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005737CytoplasmIEAcellular_component
GO:0005886Plasma membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.89051417880.48457957520.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0552228658
GSE13712_SHEARDown-0.1168130893
GSE13712_STATICUp0.0583930525
GSE19018Up0.0443666411
GSE19899_A1Down-0.0342681694
GSE19899_A2Down-0.1287345316
PubMed_21979375_A1Down-0.2613500381
PubMed_21979375_A2Down-0.1755128853
GSE35957Up0.0795221630
GSE36640Down-0.3360886798
GSE54402Down-0.0620647881
GSE9593Down-0.0053001585
GSE43922Up0.0436598604
GSE24585Down-0.0407421942
GSE37065Up0.0151175814
GSE28863_A1Down-0.1034146326
GSE28863_A2Down-0.2603515164
GSE28863_A3Up0.2402115218
GSE28863_A4Up0.0320516565
GSE48662Up0.1641991580

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.