HCSGD entry for CHST11

1. General information

Official gene symbolCHST11
Entrez ID50515
Gene full namecarbohydrate (chondroitin 4) sulfotransferase 11
Other gene symbolsC4ST C4ST-1 C4ST1 HSA269537
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000139Golgi membraneTAScellular_component
GO:0001537N-acetylgalactosamine 4-O-sulfotransferase activityIDAmolecular_function
GO:0002063Chondrocyte developmentIEAbiological_process
GO:0005975Carbohydrate metabolic processTASbiological_process
GO:0007585Respiratory gaseous exchangeIEAbiological_process
GO:0009791Post-embryonic developmentIEAbiological_process
GO:0016021Integral component of membraneIEA NAScellular_component
GO:0016051Carbohydrate biosynthetic processIEAbiological_process
GO:0030203Glycosaminoglycan metabolic processTASbiological_process
GO:0030204Chondroitin sulfate metabolic processTASbiological_process
GO:0030206Chondroitin sulfate biosynthetic processIDA IEA TASbiological_process
GO:0030512Negative regulation of transforming growth factor beta receptor signaling pathwayIEAbiological_process
GO:0033037Polysaccharide localizationIEAbiological_process
GO:0036342Post-anal tail morphogenesisIEAbiological_process
GO:0042127Regulation of cell proliferationIEAbiological_process
GO:0042733Embryonic digit morphogenesisIEAbiological_process
GO:0043066Negative regulation of apoptotic processIEAbiological_process
GO:0044281Small molecule metabolic processTASbiological_process
GO:0047756Chondroitin 4-sulfotransferase activityIDAmolecular_function
GO:0048589Developmental growthIEAbiological_process
GO:0048703Embryonic viscerocranium morphogenesisIEAbiological_process
GO:0050659N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activityIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00011047830.98325670000.02907900001.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.5499114154
GSE13712_SHEARUp0.6077815649
GSE13712_STATICUp0.4205430322
GSE19018Down-0.1157751976
GSE19899_A1Up1.1661142010
GSE19899_A2Up4.5610144582
PubMed_21979375_A1Up3.3776300969
PubMed_21979375_A2Up4.3769227262
GSE35957Down-1.5404353053
GSE36640Up0.5010170423
GSE54402Up2.4162501266
GSE9593Down-0.2495929956
GSE43922Up2.7620237621
GSE24585Up0.9301116858
GSE37065Up0.3935742459
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.0061758798

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-1MIMAT0000416MIRT002789Microarray//Microarray;OtherFunctional MTI (Weak)15685193
hsa-miR-186-5pMIMAT0000456MIRT021157SequencingFunctional MTI (Weak)20371350
hsa-miR-98-5pMIMAT0000096MIRT027800MicroarrayFunctional MTI (Weak)19088304
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  • mirRecord

MicroRNA name

mirBase ID

Target site number

MiRNA mature ID

Test method inter

MiRNA regulation site

Reporter target site

Pubmed ID

hsa-miR-1MIMAT0000416NAhsa-miR-115685193
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6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.