HCSGD entry for PODXL2
1. General information
| Official gene symbol | PODXL2 |
|---|---|
| Entrez ID | 50512 |
| Gene full name | podocalyxin-like 2 |
| Other gene symbols | EG PODLX2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005539 | Glycosaminoglycan binding | TAS | molecular_function |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0050901 | Leukocyte tethering or rolling | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7005303750 | 0.6209448311 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0823663792 |
| GSE13712_SHEAR | Down | -0.2704442976 |
| GSE13712_STATIC | Up | 0.1152921182 |
| GSE19018 | Up | 0.0668194451 |
| GSE19899_A1 | Down | -0.1907046295 |
| GSE19899_A2 | Up | 0.2564973952 |
| PubMed_21979375_A1 | Down | -0.0103377562 |
| PubMed_21979375_A2 | Up | 0.2252325215 |
| GSE35957 | Down | -0.0136095549 |
| GSE36640 | Down | -0.0906709785 |
| GSE54402 | Down | -0.1543331777 |
| GSE9593 | Up | 0.0268362895 |
| GSE43922 | Up | 0.0603231969 |
| GSE24585 | Down | -0.3012109501 |
| GSE37065 | Up | 0.0292453487 |
| GSE28863_A1 | Down | -0.2137166235 |
| GSE28863_A2 | Up | 0.0660084337 |
| GSE28863_A3 | Up | 0.2628181915 |
| GSE28863_A4 | Up | 0.0512109909 |
| GSE48662 | Down | -0.0176261798 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018113 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040329 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
