HCSGD entry for PABPC3
1. General information
| Official gene symbol | PABPC3 |
|---|---|
| Entrez ID | 5042 |
| Gene full name | poly(A) binding protein, cytoplasmic 3 |
| Other gene symbols | PABP3 PABPL3 tPABP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IDA NAS | cellular_component |
| GO:0008143 | Poly(A) binding | IDA | molecular_function |
| GO:0016071 | MRNA metabolic process | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2455298051 | 0.7181609589 | 0.9345728784 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0842376723 |
| GSE13712_SHEAR | Down | -0.0594579345 |
| GSE13712_STATIC | Down | -0.0562648630 |
| GSE19018 | Up | 0.4153401253 |
| GSE19899_A1 | Up | 0.0080187267 |
| GSE19899_A2 | Up | 0.1646530132 |
| PubMed_21979375_A1 | Down | -0.1903737566 |
| PubMed_21979375_A2 | Up | 0.0588315041 |
| GSE35957 | Up | 0.0768412845 |
| GSE36640 | Down | -0.2547696261 |
| GSE54402 | Up | 0.0567252423 |
| GSE9593 | Up | 0.2871728470 |
| GSE43922 | Up | 0.0485374465 |
| GSE24585 | Down | -0.2222762702 |
| GSE37065 | Down | -0.2186594127 |
| GSE28863_A1 | Down | -0.0747787300 |
| GSE28863_A2 | Up | 0.1019295389 |
| GSE28863_A3 | Up | 0.4149817094 |
| GSE28863_A4 | Up | 0.1774433171 |
| GSE48662 | Up | 0.0014915786 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-149-5p | MIMAT0000450 | MIRT045517 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047748 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
