HCSGD entry for CLDN20
1. General information
| Official gene symbol | CLDN20 |
|---|---|
| Entrez ID | 49861 |
| Gene full name | claudin 20 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005198 | Structural molecule activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0005923 | Tight junction | ISS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016338 | Calcium-independent cell-cell adhesion | ISS | biological_process |
| GO:0034329 | Cell junction assembly | TAS | biological_process |
| GO:0042802 | Identical protein binding | ISS | molecular_function |
| GO:0045216 | Cell-cell junction organization | TAS | biological_process |
| GO:0070830 | Tight junction assembly | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3958890848 | 0.5130809772 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3242970155 |
| GSE13712_SHEAR | Up | 0.2099468161 |
| GSE13712_STATIC | Up | 0.2217775637 |
| GSE19018 | Up | 0.1723984903 |
| GSE19899_A1 | Up | 0.1888265962 |
| GSE19899_A2 | Down | -0.0347627405 |
| PubMed_21979375_A1 | Down | -0.0675930601 |
| PubMed_21979375_A2 | Up | 0.1075019269 |
| GSE35957 | Up | 0.1600734041 |
| GSE36640 | Down | -0.1547855545 |
| GSE54402 | Up | 0.1414557154 |
| GSE9593 | Up | 0.0100824642 |
| GSE43922 | Up | 0.0611090204 |
| GSE24585 | Up | 0.1047973130 |
| GSE37065 | Down | -0.0612942463 |
| GSE28863_A1 | Down | -0.2975850689 |
| GSE28863_A2 | Down | -0.3354857645 |
| GSE28863_A3 | Down | -0.0363430915 |
| GSE28863_A4 | Down | -0.2902622909 |
| GSE48662 | Up | 0.0181170595 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
