HCSGD entry for OCA2

1. General information

Official gene symbolOCA2
Entrez ID4948
Gene full nameoculocutaneous albinism II
Other gene symbolsBEY BEY1 BEY2 BOCA D15S12 EYCL EYCL2 EYCL3 HCL3 P PED SHEP1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003333Amino acid transmembrane transportTASbiological_process
GO:0005215Transporter activityTASmolecular_function
GO:0005302L-tyrosine transmembrane transporter activityTASmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmTAScellular_component
GO:0005765Lysosomal membraneIDAcellular_component
GO:0005789Endoplasmic reticulum membraneIDAcellular_component
GO:0006726Eye pigment biosynthetic processTASbiological_process
GO:0006812Cation transportTASbiological_process
GO:0006820Anion transportTASbiological_process
GO:0007286Spermatid developmentIEAbiological_process
GO:0008283Cell proliferationIEAbiological_process
GO:0010008Endosome membraneIDAcellular_component
GO:0015711Organic anion transportTASbiological_process
GO:0015801Aromatic amino acid transportTASbiological_process
GO:0015807L-amino acid transportTASbiological_process
GO:0015828Tyrosine transportTASbiological_process
GO:0015849Organic acid transportTASbiological_process
GO:0016021Integral component of membraneIEAcellular_component
GO:0030318Melanocyte differentiationIEAbiological_process
GO:0033162Melanosome membraneIDAcellular_component
GO:0034220Ion transmembrane transportTASbiological_process
GO:0042438Melanin biosynthetic processIEAbiological_process
GO:0046942Carboxylic acid transportTASbiological_process
GO:1902475L-alpha-amino acid transmembrane transportTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.23937851150.84551208540.92540267141.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1282511630
GSE13712_SHEARUp0.0594068047
GSE13712_STATICDown-0.1958982151
GSE19018Up0.0811388204
GSE19899_A1Up0.0433663152
GSE19899_A2Up0.4715196924
PubMed_21979375_A1Down-0.1866598811
PubMed_21979375_A2Up0.1329207537
GSE35957Up0.2193944062
GSE36640Down-0.0697221897
GSE54402Up1.1443427648
GSE9593Up0.4228855072
GSE43922Up0.0643278863
GSE24585Down-0.3038630236
GSE37065Down-0.1306394843
GSE28863_A1Up0.0265179753
GSE28863_A2Up0.0069571268
GSE28863_A3Up0.1689658340
GSE28863_A4Up0.0726025974
GSE48662Up0.0529901385

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-124-3pMIMAT0000422MIRT022272MicroarrayFunctional MTI (Weak)18668037
hsa-miR-181a-5pMIMAT0000256MIRT047322CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.