HCSGD entry for TRIM72
1. General information
| Official gene symbol | TRIM72 |
|---|---|
| Entrez ID | 493829 |
| Gene full name | tripartite motif containing 72 |
| Other gene symbols | MG53 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001778 | Plasma membrane repair | ISS | biological_process |
| GO:0001786 | Phosphatidylserine binding | ISS | molecular_function |
| GO:0003012 | Muscle system process | ISS | biological_process |
| GO:0006887 | Exocytosis | IEA | biological_process |
| GO:0007517 | Muscle organ development | ISS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0030659 | Cytoplasmic vesicle membrane | ISS | cellular_component |
| GO:0042383 | Sarcolemma | ISS | cellular_component |
| GO:0051260 | Protein homooligomerization | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5437393222 | 0.4398373162 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0886987948 |
| GSE13712_SHEAR | Up | 0.1526881857 |
| GSE13712_STATIC | Down | -0.0182598693 |
| GSE19018 | Up | 0.0961992500 |
| GSE19899_A1 | Up | 0.0423855689 |
| GSE19899_A2 | Down | -0.0578401694 |
| PubMed_21979375_A1 | Down | -0.1309308779 |
| PubMed_21979375_A2 | Down | -0.0850692045 |
| GSE35957 | Down | -0.0338693044 |
| GSE36640 | Up | 0.1323787774 |
| GSE54402 | Down | -0.0626243955 |
| GSE9593 | Up | 0.2033238620 |
| GSE43922 | Up | 0.1592170695 |
| GSE24585 | Down | -0.1615803922 |
| GSE37065 | Down | -0.2600093415 |
| GSE28863_A1 | Down | -0.2865699317 |
| GSE28863_A2 | Down | -0.3003819289 |
| GSE28863_A3 | Up | 0.5553999630 |
| GSE28863_A4 | Up | 0.2530973547 |
| GSE48662 | Up | 0.0618087071 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 25701873 | We focused on two of these proteins, NDRG2 and TRIM72, due to their putative roles in myoblast proliferation and myogenesis |
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