HCSGD entry for NHS

1. General information

Official gene symbolNHS
Entrez ID4810
Gene full nameNance-Horan syndrome (congenital cataracts and dental anomalies)
Other gene symbolsCXN SCML1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0002088Lens development in camera-type eyeIEAbiological_process
GO:0005737CytoplasmIEAcellular_component
GO:0005923Tight junctionIEAcellular_component
GO:0005925Focal adhesionIEAcellular_component
GO:0016324Apical plasma membraneIEAcellular_component
GO:0030027LamellipodiumIEAcellular_component
GO:0030154Cell differentiationIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.85920208960.05973396150.99999024730.4600015506

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.2923783764
GSE13712_SHEARDown-0.1391420745
GSE13712_STATICDown-0.0466693384
GSE19018Up0.0611424078
GSE19899_A1Up0.0564136621
GSE19899_A2Down-0.6972321684
PubMed_21979375_A1Down-0.2051116283
PubMed_21979375_A2Down-0.3746594330
GSE35957Down-0.5612429294
GSE36640Down-0.5794334419
GSE54402Down-0.8913871521
GSE9593Up0.1755991893
GSE43922Up0.0418400565
GSE24585Down-0.4541466357
GSE37065Up0.1797058574
GSE28863_A1Up0.4102026579
GSE28863_A2Up0.4400214284
GSE28863_A3Down-0.0699225069
GSE28863_A4Up0.0096578003
GSE48662Down-0.1860924448

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.