HCSGD entry for NAB1
1. General information
| Official gene symbol | NAB1 |
|---|---|
| Entrez ID | 4664 |
| Gene full name | NGFI-A binding protein 1 (EGR1 binding protein 1) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001958 | Endochondral ossification | IEA | biological_process |
| GO:0005634 | Nucleus | IEA NAS | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | NAS | biological_process |
| GO:0008134 | Transcription factor binding | IEA | molecular_function |
| GO:0014037 | Schwann cell differentiation | IEA | biological_process |
| GO:0042552 | Myelination | IEA | biological_process |
| GO:0045682 | Regulation of epidermis development | IEA | biological_process |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IEA NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0348164583 | 0.5057726492 | 0.4261199164 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1654127695 |
| GSE13712_SHEAR | Down | -0.3998574541 |
| GSE13712_STATIC | Down | -0.3769603590 |
| GSE19018 | Up | 0.2802864778 |
| GSE19899_A1 | Up | 0.4132073462 |
| GSE19899_A2 | Up | 1.1852485930 |
| PubMed_21979375_A1 | Up | 1.8390910514 |
| PubMed_21979375_A2 | Up | 1.0341132348 |
| GSE35957 | Down | -0.2113073629 |
| GSE36640 | Down | -0.4008430331 |
| GSE54402 | Up | 0.3359581358 |
| GSE9593 | Down | -0.2346754999 |
| GSE43922 | Up | 1.2607077421 |
| GSE24585 | Up | 0.0503990854 |
| GSE37065 | Up | 0.4124367799 |
| GSE28863_A1 | Up | 0.0431490876 |
| GSE28863_A2 | Down | -0.2802223549 |
| GSE28863_A3 | Down | -0.0826625938 |
| GSE28863_A4 | Down | -0.1609481885 |
| GSE48662 | Up | 0.1117379142 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018222 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-1 | MIMAT0000416 | MIRT023860 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024468 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026655 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046419 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049692 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15a-5p | MIMAT0000068 | MIRT051328 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
