HCSGD entry for MYF6

1. General information

Official gene symbolMYF6
Entrez ID4618
Gene full namemyogenic factor 6 (herculin)
Other gene symbolsCNM3 MRF4 bHLHc4 myf-6
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001756SomitogenesisIEAbiological_process
GO:0003700Sequence-specific DNA binding transcription factor activityTASmolecular_function
GO:0005634NucleusTAScellular_component
GO:0005654NucleoplasmTAScellular_component
GO:0006357Regulation of transcription from RNA polymerase II promoterTASbiological_process
GO:0007519Skeletal muscle tissue developmentTASbiological_process
GO:0035914Skeletal muscle cell differentiationIEAbiological_process
GO:0042692Muscle cell differentiationTASbiological_process
GO:0042693Muscle cell fate commitmentISSbiological_process
GO:0043403Skeletal muscle tissue regenerationIEAbiological_process
GO:0045892Negative regulation of transcription, DNA-templatedIEAbiological_process
GO:0045944Positive regulation of transcription from RNA polymerase II promoterISSbiological_process
GO:0046982Protein heterodimerization activityISSmolecular_function
GO:0051149Positive regulation of muscle cell differentiationTASbiological_process
GO:0060415Muscle tissue morphogenesisIEAbiological_process
GO:0070888E-box bindingISSmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.56422714180.74657204130.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0302096882
GSE13712_SHEARDown-0.0124995170
GSE13712_STATICDown-0.0953288676
GSE19018Up0.1099653785
GSE19899_A1Up0.2266234689
GSE19899_A2Up0.1175598226
PubMed_21979375_A1Up0.1371813593
PubMed_21979375_A2Down-0.2100852238
GSE35957Up0.0630331846
GSE36640Down-0.2940741138
GSE54402Down-0.0616056160
GSE9593Down-0.1012778163
GSE43922Up0.0148451364
GSE24585Up0.0899195650
GSE37065Down-0.0014845521
GSE28863_A1Up0.0336916898
GSE28863_A2Up0.1558315814
GSE28863_A3Up0.1557414060
GSE28863_A4Up0.1179410953
GSE48662Up0.0537844503

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-9-5pMIMAT0000441MIRT021325MicroarrayFunctional MTI (Weak)17612493
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.